MIBBI: Minimum Information for Biological and Biomedical Investigations

Bioscience reporting guidelines and tools

portal

foundry

about

	Please contribute: Send an email request and you will be sent login credentials.
	Modules may import other modules (e.g., Sampling event imports Date and Time).
	As a general design rule for MIBBI Foundry modules, structural elements ('headings') cannot require data.
	Module status denoted by bullets: Stub (no content); Under construction; Draft available; Released.
	The 'core' provides generic content for re-use in/with other MIBBI modules and by community-specific projects.

Core modules		Other modules
	Investigation Study design Study overview Organism L1 Organismal genetic component Cell culture Environment Geographic location Sampling event Sample description Sample size Sample processing Reagent Analytical technique Data processing Statistical analysis Person or responsible role Date Time Data set Publication Organization Database record		Extension of Organism L1 Organism L2 Extension of Sample description Biological sample description Extension of Data set RNAi assay data set Extension of Reagent Fluorescence reagent Extensions of Analytical technique Column chromatography Nucleic acid sequencing Mass spectrometry Capillary electrophoresis Flow cytometry Gel electrophoresis RNAi assay Extensions of Data processing Nucleic acid sequencing data processing Mass spectrometry informatics Flow cytometry data analysis Gel informatics RNAi assay data analysis Project-specific extensions MIGS Investigation MIGS Organism

Project-related discussion

To join in MIBBI Foundry development, send us an email and you will be sent login credentials.
The MIBBI Foundry email discussion list is the place for public discussion of Foundry development work.
General (MIBBI/MI-related) issues are better discussed in the MIBBI Open Discussion Forum.

Preparatory analysis

Performed a 'zoomed out' cross analysis of guidelines registered by Summer 2008, following the I/S/A structure (as described on the 'About us' page).
Produced a coarse-grained visual guide to the various scopes of those projects, and how they overlap.
An Excel file containing the results of the analysis is available for download.

Resources

The MIBBI Foundry modules page
The XML Schema for the XML version of the modules

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